PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G23730.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 362aa    MW: 40043.1 Da    PI: 7.2528
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G23730.4genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.7e-1094133544
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                      k  rr+++NReAAr+sR+RKka++++Le    +L +  ++
  LPERR07G23730.4  94 KTMRRLAQNREAARKSRLRKKAYVQQLESSKLKLAQLEQE 133
                      7789************************855444444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.0E-888137No hitNo description
SMARTSM003381.8E-790153IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4592136IPR004827Basic-leucine zipper domain
PfamPF001703.9E-794135IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.25E-794137No hitNo description
CDDcd147081.43E-2294146No hitNo description
PROSITE patternPS00036097112IPR004827Basic-leucine zipper domain
PfamPF141449.7E-34176251IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MVVCRRRLAE ISPNRHGRSF TWRRALFKLL WSVKEIGQPV VFQIDINASS RTDTSIVVDN  60
DDKNHQFENG HSGAIMASNS SDRSDRSDKP TDQKTMRRLA QNREAARKSR LRKKAYVQQL  120
ESSKLKLAQL EQELQKARQQ GIFISSSGDQ THAMSGNGAL TFDLEYTRWL EEQNKQINEL  180
RTAVNAHASD SDLRLIVDGI MAHYDEIFKV KGVAAKADVF HILSGMWKTP AERCFLWLGG  240
FRPSELLKLL ANHLEPLTEQ QLLGLNNLQE SSQQAEDALS QGMEALQQSL AETLAGSLGS  300
SGSSGNVANY MGQMAMAMGG QPATADIASN ATNSDDPTSL SCSSCHTRLL FTVACFEFTV  360
AC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0512950.0AB051295.1 Oryza sativa OsNIF2 mRNA for bZIP transcription factor, complete cds.
GenBankAK1004400.0AK100440.1 Oryza sativa Japonica Group cDNA clone:J023089F16, full insert sequence.
GenBankCT8311860.0CT831186.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117D18, full insert sequence.
GenBankHQ8588070.0HQ858807.1 Oryza sativa Japonica Group isolate UT1185 bZIP transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658160.11e-177PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_006658161.11e-177PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_015695229.11e-177PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotP239231e-142HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-141HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0D9X3420.0A0A0D9X342_9ORYZ; Uncharacterized protein
STRINGOB07G32440.11e-176(Oryza brachyantha)
STRINGORGLA07G0213300.11e-176(Oryza glaberrima)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-100TGACG motif-binding factor 6